Treatment of pneumonias

Treatment of pneumonias

How to treat a pneumonia before the organism is known, which antibiotic for which severity, how long, and what to do when the patient does not get better.

Why the antibiotic has to fit the organism

3 scenes, 0:28

A film in three scenes on a white page, each a cell cut open towards the viewer. First, a pneumococcus, a pair of pale olive lance-shaped cells end to end, each wrapped in an amber membrane and a thick violet wall: small graphite dots, a β-lactam, arrive and settle on the wall; where they settle the wall thins and opens, the pale contents bulge through the gaps, and the cell bursts, spilling its contents. Second, a single small rounded Mycoplasma, an amber membrane round pale olive contents with many small red ribosomes on its cut face and no wall: the graphite β-lactam dots drift past and leave; then darker graphite dots, a macrolide, cross the membrane and settle on the ribosomes, which pale, while the cell stays whole. Third, a large pale blue macrophage with its nucleus, and inside it a vacuole holding short pale olive rods, Legionella: the β-lactam dots gather round the outside of the macrophage and stay there; the macrolide dots cross into it, gather inside, reach the vacuole, and the rods fade away.

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A β-lactam bursts the pneumococcus

Scenes

About this film

An antibiotic works only if it can reach its target in the organism. β-lactams such as amoxicillin bind the enzymes that build the bacterial wall, so the wall weakens and the pneumococcus bursts. Mycoplasma has no wall at all, so β-lactams cannot touch it, and Legionella lives inside the alveolar macrophages, where β-lactams gather poorly and fail to clear it. For these atypical organisms a macrolide, a tetracycline such as doxycycline, or a fluoroquinolone is needed: drugs that act on the ribosome or the DNA and that gather inside cells.

Simplified: not to scale: the drug molecules drawn as dots far larger than life, and far fewer; each cell cut open, and the drug drawn only where it sits on the cut face or the surface; the pneumococcal wall drawn as one layer without its capsule, and the enzymes the β-lactam binds as places on the wall, and the wall drawn opening as the drug binds, though it gives way as the cell's own enzymes go on breaking it down; one dot colour for any β-lactam and one for any macrolide, though tetracyclines and fluoroquinolones also reach Mycoplasma and Legionella, the fluoroquinolones acting on DNA rather than the ribosome; the macrolide drawn shutting the ribosomes down and clearing Legionella, though it blocks the making of many proteins rather than all, and macrolides mostly stop bacteria growing rather than kill them, leaving the body's defences to clear them; Legionella shown only in a macrophage, though it also multiplies in alveolar epithelial cells; hours squeezed into seconds.

10 sources
  1. Kumar and Clark's Clinical Medicine, 10th edition. Elsevier, 2021. Chapter 28, Respiratory disease: community-acquired pneumonia (pp. 963–964).
  2. Papp-Wallace KM, Endimiani A, Taracila MA, Bonomo RA. Antimicrob Agents Chemother 2011;55:4943–60. Carbapenems: past, present, and future
  3. Parker N et al. Microbiology. OpenStax, 2016. 3.3 Unique characteristics of prokaryotic cells
  4. Parker N et al. Microbiology. OpenStax, 2016. 14.3 Mechanisms of antibacterial drugs
  5. Waites KB, Talkington DF. Mycoplasma pneumoniae and its role as a human pathogen. Clin Microbiol Rev 2004;17(4):697–728.
  6. Vázquez-Laslop N, Mankin AS. How macrolide antibiotics work. Trends Biochem Sci 2018;43(9):668–84.
  7. Corrin B, Nicholson AG. Pathology of the Lungs, 3rd edition. Churchill Livingstone, 2011. Chapter 5, Infectious diseases: pneumococcal pneumonia and Legionnaires’ disease.
  8. Cunha BA. Legionnaires' disease: clinical differentiation from typical and other atypical pneumonias. Infect Dis Clin North Am 2010;24(1):73–105.
  9. Bongers S, Hellebrekers P, Leenen LPH, Koenderman L, Hietbrink F. Intracellular penetration and effects of antibiotics on Staphylococcus aureus inside human neutrophils: a comprehensive review. Antibiotics (Basel) 2019;8(2):54.
  10. Barcia-Macay M, Seral C, Mingeot-Leclercq MP, Tulkens PM, Van Bambeke F. Pharmacodynamic evaluation of the intracellular activities of antibiotics against Staphylococcus aureus in a model of THP-1 macrophages. Antimicrob Agents Chemother 2006;50(3):841–51.

At a glance

  1. Treatment starts before the organism is known, as soon as the diagnosis is made and within 4 hours of arrival in hospital. Choose by the setting, severity (CRB65 or CURB65 with judgement), risk of resistance, and local data.
  2. In the usual UK scheme for adults with CAP: low severity, amoxicillin; moderate, amoxicillin with clarithromycin if atypical organisms are suspected; high, co-amoxiclav with clarithromycin. Doxycycline, clarithromycin and levofloxacin are the penicillin-allergy options. All for 5 days.
  3. A penicillin covers the pneumococcus but not the cell-wall-less or intracellular organisms; macrolides, doxycycline and fluoroquinolones cover those.
  4. Stop at 5 days if the patient is stable. Review at 48 hours, switch from intravenous to oral when possible, and narrow the antibiotic when cultures return.
  5. Support the patient with oxygen, fluids, analgesia and thromboprophylaxis. Consider hydrocortisone for high-severity disease in hospital, and drain a pleural infection.
  6. If there is no response in 48 to 72 hours, think of a complication, a resistant organism or a different diagnosis, rather than another antibiotic by reflex.

Definition and overview

The treatment of pneumonia has three jobs: to kill the organism with an antibiotic (or antiviral), to support the failing lung and the body until it recovers, and to find and treat complications. The antibiotic is chosen blind, because the organism is found in only a minority to a half of patients, and the result comes after treatment has begun. A good choice depends on the answers to four questions:

  1. 1

    Where was it caught?

    Community, hospital (and how long after admission), or on a ventilator. The setting predicts the organisms and their resistance (the other topics of this chapter).
  2. 2

    How severe is it?

    The CRB65 or CURB65 score, the oxygen need, and judgement. Severity sets the place of care, the route and the breadth of the antibiotic.
  3. 3

    Is the patient at risk of a resistant or unusual organism?

    Recent antibiotics or hospital stay, colonisation by a multidrug-resistant organism, bronchiectasis, immunosuppression, aspiration, travel or exposure.
  4. 4

    What are the patient's circumstances?

    Allergy, pregnancy, kidney and liver function, drug interactions (macrolides and QT-prolonging drugs, fluoroquinolones and corticosteroids), and whether they can take tablets.

Etiology and pathophysiology

The pathogens the treatment has to meet

Pathogen groupExamplesWhat reaches it
Gram-positive cocciS. pneumoniae, Staph. aureusβ-lactams (aminopenicillin for the pneumococcus; flucloxacillin for meticillin-sensitive Staph. aureus); vancomycin, teicoplanin or linezolid for MRSA
Respiratory gram-negativesH. influenzae, Moraxella catarrhalisamoxicillin if no β-lactamase; co-amoxiclav, a cephalosporin or doxycycline otherwise
Enteric gram-negatives and PseudomonasKlebsiella, E. coli, Pseudomonas aeruginosaan antipseudomonal β-lactam (piperacillin–tazobactam, ceftazidime, meropenem), levofloxacin
Anaerobesafter aspirationco-amoxiclav; often covered anyway by the above
Atypical bacteriaMycoplasma, Chlamydia, Legionella, Coxiellamacrolides, doxycycline, fluoroquinolones; not β-lactams
Virusesinfluenza, SARS-CoV-2oseltamivir for influenza; dexamethasone and others for COVID-19; support for the rest
Pneumocystis and fungihigh-dose co-trimoxazole; antifungals

The classes of drug are described in pharmacology: the penicillins, the cephalosporins and the carbapenems and glycopeptides.

Why a drug fails

  • No target. A β-lactam acts on the bacterial cell wall; Mycoplasma has no wall, and Legionella, Chlamydia and Coxiella live inside cells that β-lactams penetrate badly.
  • Destruction of the drug. β-lactamases of H. influenzae and Moraxella destroy amoxicillin, which is why co-amoxiclav (with the β-lactamase inhibitor clavulanate) is used when they are likely. Extended-spectrum β-lactamases in enteric bacteria defeat most cephalosporins and need a carbapenem.
  • Altered target. The pneumococcus resists penicillin by altering its penicillin-binding proteins, which a higher dose of amoxicillin can overcome in pneumonia (not in meningitis); MRSA makes an altered binding protein (PBP2a) that defeats all the usual β-lactams.
  • Efflux and target modification. Pneumococci resist macrolides by methylating the ribosome or pumping the drug out, so macrolide resistance limits their use as sole treatment.
  • Not enough drug. A sequestered focus such as an empyema or abscess, a wrong dose, poor absorption or non-adherence.
Where each antibiotic can reach
Three cells cut through, side by side on a white plate. On the left, a pneumococcus: two sage-green lance-shaped cells end to end, pointed at their outer ends, each wrapped in a thin amber membrane and outside that a thick pale violet wall, small red ribosomes inside; small grey dots, a β-lactam, sit in the wall all round. In the middle, a smaller rounded Mycoplasma: green inside a thin amber membrane, with no wall; darker grey dots, a macrolide, sit beside half of its red ribosomes, and the lighter grey β-lactam dots lie scattered outside it. On the right, a large pale blue macrophage with a darker kidney-shaped nucleus, and in it a round vacuole edged by an amber membrane holding four short olive-green rods, Legionella; dark macrolide dots are scattered through the macrophage and in the vacuole, while the lighter β-lactam dots lie round the outside of the macrophage.

Point at a name or a part to light it.

A β-lactam such as amoxicillin acts on the bacterial wall, so it kills the pneumococcus but cannot touch Mycoplasma, which has no wall, and does not clear Legionella, which lives inside the alveolar macrophages, where β-lactams gather poorly. Macrolides act on the ribosome and gather inside cells, so they reach both; doxycycline and the fluoroquinolones do too. This is why atypical cover means adding a macrolide or doxycycline to a β-lactam, or using a fluoroquinolone alone.

Simplified: not to scale: the drug molecules drawn as dots far larger than life, and far fewer, and the cells at sizes that fit side by side, though a macrophage is many times larger than a bacterium; the wall drawn as one layer without the pneumococcus's capsule, the β-lactam drawn in the wall where its target enzymes lie at the wall's inner face, and the pneumococcus's own ribosomes without a macrolide; one dot colour for any β-lactam and one for any macrolide, standing also for doxycycline, which binds the other ribosomal subunit, and the fluoroquinolones, which act on DNA; each cell cut through and simplified: the macrophage with one nucleus and one vacuole, Legionella as four rods, and shown only in a macrophage, though it also multiplies in alveolar epithelial cells.

10 sources
  1. Kumar and Clark's Clinical Medicine, 10th edition. Elsevier, 2021. Chapter 28, Respiratory disease: community-acquired pneumonia (pp. 963–964).
  2. Papp-Wallace KM, Endimiani A, Taracila MA, Bonomo RA. Antimicrob Agents Chemother 2011;55:4943–60. Carbapenems: past, present, and future
  3. Parker N et al. Microbiology. OpenStax, 2016. 3.3 Unique characteristics of prokaryotic cells
  4. Parker N et al. Microbiology. OpenStax, 2016. 14.3 Mechanisms of antibacterial drugs
  5. Waites KB, Talkington DF. Mycoplasma pneumoniae and its role as a human pathogen. Clin Microbiol Rev 2004;17(4):697–728.
  6. Vázquez-Laslop N, Mankin AS. How macrolide antibiotics work. Trends Biochem Sci 2018;43(9):668–84.
  7. Corrin B, Nicholson AG. Pathology of the Lungs, 3rd edition. Churchill Livingstone, 2011. Chapter 5, Infectious diseases: pneumococcal pneumonia and Legionnaires’ disease.
  8. Cunha BA. Legionnaires' disease: clinical differentiation from typical and other atypical pneumonias. Infect Dis Clin North Am 2010;24(1):73–105.
  9. Bongers S, Hellebrekers P, Leenen LPH, Koenderman L, Hietbrink F. Intracellular penetration and effects of antibiotics on Staphylococcus aureus inside human neutrophils: a comprehensive review. Antibiotics (Basel) 2019;8(2):54.
  10. Barcia-Macay M, Seral C, Mingeot-Leclercq MP, Tulkens PM, Van Bambeke F. Pharmacodynamic evaluation of the intracellular activities of antibiotics against Staphylococcus aureus in a model of THP-1 macrophages. Antimicrob Agents Chemother 2006;50(3):841–51.

Clinical features

Judging severity

European and British practice uses the CRB65 and CURB65 scores with judgement. The American criteria define severe CAP, which needs intensive care, by one major or three minor criteria:

Major criteriaMinor criteria
septic shock needing vasopressors; respiratory failure needing mechanical ventilationrespiratory rate of 30 or more; PaO2/FiO2 of 250 or less; multilobar infiltrates; confusion; uraemia; leucopenia (below 4 ×10⁹/L); thrombocytopenia (below 100 ×10⁹/L); hypothermia (below 36 °C); hypotension needing aggressive fluid resuscitation

Judging response

Most patients start to improve in 48 to 72 hours: the fever eases, the pulse and breathing rate fall, and the oxygen need drops. Clinical stability, which allows the switch to oral antibiotics and discharge, means, in the stricter American definition, a fever-free patient with a systolic pressure of 90 mmHg or more, a pulse of 100 or less, a respiratory rate of 24 or less and a saturation of 90 per cent or more on air (or the patient's baseline); the UK rules for stopping antibiotics and for discharge are below. The chest film is slow, and can be worse after improvement; the cough can last for weeks.

A patient who does not improve should be reassessed. The causes of a slowly resolving pneumonia are:

  • incorrect or incomplete treatment: resistance, inadequate dose or duration, non-adherence or malabsorption;
  • a complication: parapneumonic effusion, empyema or lung abscess;
  • an underlying lesion: an obstructing tumour, bronchiectasis or tuberculosis; and
  • another diagnosis: pulmonary embolism, cryptogenic organising pneumonia, eosinophilic pneumonia, pulmonary haemorrhage or a lung cancer.

A non-bacterial cause such as influenza should be considered too, a sputum sample sent if not done, and the patient referred to hospital if they fail to improve in the community.

Diagnosis and management

Supportive care

  • Oxygen to a saturation of 94 to 98 per cent (88 to 92 per cent in those at risk of hypercapnia). For respiratory failure that does not respond to a mask, a trial of high-flow nasal oxygen is advised, and some patients benefit from CPAP or non-invasive ventilation.
  • Fluids for the dry or hypotensive, with the sepsis pathway when sepsis is suspected.
  • Analgesia for pleuritic pain, so that the patient can breathe deeply and cough.
  • Thromboprophylaxis with low-molecular-weight heparin for patients admitted for more than 12 hours.
  • Nutrition, and physiotherapy only when sputum is retained.
  • Stopping smoking, and advice on vaccination.

Antibiotics for adults with community-acquired pneumonia

The usual UK regimens for adults:

SeverityFirst lineAlternative (penicillin allergy; in low severity also if amoxicillin is unsuitable)
Lowamoxicillin 500 mg three times a day, by mouth, 5 days (higher doses can be used)doxycycline 200 mg on day 1 then 100 mg daily (5 days in all); or clarithromycin 500 mg twice a day; erythromycin 500 mg four times a day in pregnancy
Moderateamoxicillin 500 mg three times a day, with clarithromycin 500 mg twice a day if atypical organisms are suspected (erythromycin in pregnancy), 5 daysdoxycycline or clarithromycin, 5 days
Highco-amoxiclav 500/125 mg three times a day by mouth, or 1.2 g three times a day intravenously, with clarithromycin 500 mg twice a day (erythromycin in pregnancy), 5 dayslevofloxacin 500 mg twice a day, by mouth or intravenously, 5 days; consult the microbiologist if a fluoroquinolone is unsuitable

Other guidelines differ in detail. American practice gives outpatients without comorbidity amoxicillin 1 g three times a day or doxycycline; hospital patients with non-severe disease a β-lactam with a macrolide, or a fluoroquinolone alone; and severe disease a β-lactam with a macrolide (or a fluoroquinolone). European guidance for severe CAP adds a macrolide, not a fluoroquinolone, to the β-lactam, for 3 to 5 days. In severe disease with penicillin allergy the UK regimen offers levofloxacin only, while other British guidance offers a cephalosporin with clarithromycin where the allergy allows, the non-fluoroquinolone route.

How the antibiotic is used:

  • Time. The first dose goes in as soon as the diagnosis is made and within 4 hours of arrival in hospital, and within an hour for patients with high-risk features or suspected sepsis.
  • Route. Oral first if the patient can swallow and is not severely ill. If an intravenous drug is started, review by 48 hours and switch to oral to finish the course.
  • Duration. Stop after 5 days unless the microbiology calls for longer or the patient is not clinically stable (a fever in the last 48 hours, or more than one of a systolic pressure below 90 mmHg, a pulse over 100, a respiratory rate over 24, a saturation under 90 per cent on air). Longer courses are for complications: an empyema, an abscess, Staph. aureus, or some atypical infections.
  • De-escalation. If cultures or the pneumococcal urinary antigen identify the organism, narrow the antibiotic.
  • Biomarkers. In hospital, CRP or procalcitonin can be measured on day 3 or 4 if treatment failure is a worry; a high or unchanged level suggests failure and needs a senior review.

Once the cause is known:

CauseTreatment
Pneumococcusamoxicillin or benzylpenicillin
Staph. aureus (MSSA)flucloxacillin; MRSA: vancomycin, teicoplanin or linezolid; a toxin-suppressing drug such as clindamycin or linezolid is considered in necrotising pneumonia
Legionellalevofloxacin (or azithromycin), 7 to 10 days, and 14 to 21 days if severe, slow to respond or immunosuppressed
Mycoplasma, Chlamydiadoxycycline or a macrolide
Pseudomonasan antipseudomonal β-lactam, often with a second agent in severe disease
Aspirationco-amoxiclav; routine anaerobic cover is otherwise not advised unless there is a lung abscess or empyema
Influenzaoseltamivir, plus antibiotics if a bacterial infection is likely
Pneumocystishigh-dose co-trimoxazole, with steroids if hypoxic in HIV-associated disease

The hospital-acquired and immunocompromised regimens are in hospital-acquired pneumonia.

Fluoroquinolones, levofloxacin and moxifloxacin, work against the pneumococcus and the atypical organisms but can cause tendon rupture, neuropathy, psychiatric and sleep disturbance, QT prolongation, aortic dissection and Clostridioides difficile infection. In the UK they are restricted to when other antibiotics are inappropriate, and are not given with a corticosteroid if it can be avoided.

Corticosteroids

Adults with high-severity CAP in hospital can be given a corticosteroid, for 4 to 7 days or until discharge, preferably intravenous hydrocortisone. In a French trial of adults in intensive care, hydrocortisone as an infusion of 200 mg a day, for 4 or 7 days and tapered to 8 or 14 days in all, lowered the 28-day mortality (6.2 against 11.9 per cent); patients on vasopressors for septic shock and with influenza were excluded. Other trials were less clear, and one large trial was stopped early without a large mortality benefit. The older European guidance limits steroids to patients in shock and excludes viral pneumonia, and American guidance moved from advising against routine steroids to suggesting them in severe CAP. A penicillin-allergic patient with high-severity disease is a steroid candidate who is also offered levofloxacin, and a fluoroquinolone is best not given together with a corticosteroid, which favours the non-fluoroquinolone regimen.

Complications and drainage

An effusion is aspirated under ultrasound, and pleural fluid with a pH below 7.2, or frank pus or organisms, means an infected (complicated) effusion or an empyema that must be drained urgently, with a longer antibiotic course. A lung abscess needs a long course, 4 to 6 weeks, and drainage if it does not settle.

Epidemiology

Pneumonia is one of the commonest reasons for prescribing antibiotics, so how we treat it drives resistance. Pneumococcal resistance to penicillin and to macrolides varies widely between countries, and macrolide resistance tends to be higher in southern than in northern Europe (an EU/EEA mean of 19.0 per cent of invasive isolates in 2024, up from 16.8 per cent in 2020), which is why local data matter and why a macrolide is not used alone as empirical treatment of pneumococcal disease where resistance is common (American guidance allows a macrolide alone only where pneumococcal resistance is below 25 per cent). Mycoplasma resistance to macrolides is very high in East Asia. MRSA, extended-spectrum β-lactamase producers and carbapenem-resistant organisms are the problems of hospital-acquired disease. The consequences for practice are the short 5-day course, the narrowest drug that fits, and the habit of reviewing the antibiotic when the cultures are back; the restrictions on fluoroquinolones follow from their harms.

Short courses are justified by trials and reviews, which found that about 5 days is as good as longer courses in adults who have reached clinical stability, and both American and UK guidance now give 5 days.

Prognosis

With the right antibiotic, most patients with low- and moderate-severity pneumonia recover in a few weeks. Patients can be given a timetable: the fever is gone in a week; by 4 weeks the chest pain and sputum have gone down; by 6 weeks the cough and breathlessness have; by 3 months most symptoms have gone, although fatigue may linger; and by 6 months most people feel back to normal. Advise them to seek help if the symptoms get worse rapidly, if they do not begin to improve within 3 days, or if they become systemically unwell.

Discharge and after:

  • Do not discharge patients who in the last 24 hours had two or more of a temperature above 37.5 °C, a respiratory rate of 24 or more, a pulse above 100, a systolic pressure of 90 or less, a saturation below 90 per cent, an abnormal mental state, or an inability to eat unaided.
  • A follow-up chest film is not routine. Consider one at 6 weeks for patients at risk of lung cancer or lung disease (smokers, over 50), with persisting or worsening symptoms, or unexplained weight loss.
  • Prevent the next episode by stopping smoking, by influenza vaccination for those at risk, and by pneumococcal vaccination, given before discharge to unvaccinated patients over 65 admitted with CAP. COVID-19 and RSV vaccination are offered to the groups at risk.

Check yourselfAnswer, then say how sure you were: a lucky guess still counts as a weak point.

1A 40-year-old non-pregnant adult has low-severity community-acquired pneumonia and no allergies. What is the usual first-line treatment?

2A young adult admitted with moderate-severity pneumonia has had a gradual onset, a dry cough and headache, and a flatmate with the same illness. What is added to amoxicillin?

3A patient on day 5 of treatment for pneumonia has been afebrile for 3 days but has a pulse of 108 and a respiratory rate of 26. What does the guideline suggest?

4On day 4 of appropriate antibiotics for pneumonia, a patient has a swinging fever and a rising CRP. What is the best next step?

5In UK practice, what replaces co-amoxiclav with clarithromycin for high-severity pneumonia in a patient with a true penicillin allergy?

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Pneumonia

Choosing the antibiotic by severity and setting.